.:: BioCas ::.


sugaratoms:

False-colour SEM of a group of human chromosomes

credit



contemplatingmadness:

Ten Things You Probably Didn’t Know About DNA

It may be the basis of all life on Earth, but we’re betting there’s still a lot you don’t know about deoxyribonucleic acid. Who discovered it? What makes it “right-handed”? And what does it have to do with LSD? Find out after the jump.

10. James Watson and Francis Crick did not discover DNA
Neither did Rosalind Franklin or Maurice Wilkins, for that matter. In actuality, the credit for discovering DNA goes to oneFriedrich Miescher. In 1869, the Swiss biochemist was inspecting the pus on used surgical bandages (yay, science!) when a substance he didn’t recognize passed into his microscope’s field of view. He called the substance “nuclein,” because, he noted, it was located within the nuclei of cells.

9. Good Call, Miescher
Which is funny, because you can actually find a fair bit of DNA in mitochondria, as well. What’s interesting, though, is that out of all your DNA, it’s the stuff in your nuclei that play the most important role from a hereditary standpoint; remarkably, Miescher would later speculate in a letter to his uncle that this mysterious “nuclein” might actually play a role in heredity.

8. It took decades to prove Miescher’s hunch was right
Miescher’s insight was years, if not decades, ahead of its time. By the turn of the 20th century, scientists had begun to strongly suspect that chromosomes — densely packed structures of DNA and protein — were involved in the transmission of traits from one generation to the next, but it wasn’t until researcher Thomas Hunt Morgan showed that molecular differences in chromosomes actually corresponded to heritable physical characteristics in fruit flies that anybody truly appreciated the fundamental role of said chromosomes in the transfer of genetic information.

7. Wait… what genetic information?
What’s interesting about the phrase “genetic information” is that even as late as 1933, the year Morgan received a Nobel Prize for his groundbreaking work on chromosomes, many scientists still doubted the existence of so-called “genes” — information, presumably housed within chromosomes, that gave rise to the physical traits Morgan had observed in his experiments. At the time, Morgan wrote that there was no consensus “as to what the genes are — whether they are real or purely fictitious.”

The concept of genes only really found its footing in 1944, when molecular biologistOswald Avery (pictured here) showed thatgenes were not only real, but that they were composed of DNA (and not, for example, proteins, which — also being contained in chromosomes — many scientists had assumed comprised our true “genetic” blueprint).

6. LSD May have played a role in the discovery of DNA’s structure
Just nine years after Avery’s discovery, James Watson and Francis Crick published an article inNature describing the double helical structure of DNA — a structure which, according to some accounts, Crick claims to have perceived while high on LSD.

5. Why is it Watson and Crick and not Crick and Watson?
Joe Hanson actually posed this excellent question last week on It’s Okay to be Smart:

How did they decide whose name would come first on their paper? That’s where we get the comfortable meter of their paired and classic name pairing from. I mean, did they flip a coin? It was a fairly even collaboration, and I don’t know why their names weren’t on the paper in alphabetical order.

I mean, just think of that. What if it had been Crick & Watson? A huge part of the biological lexicon would be changed:

“Well Steve, you can clearly see the canonical Crick & Watson base-pairing there in the hairpin.”

It turns out they did just flip a coin, though to hear James Watson tell it, it sounds like he felt he deserved to be first author, anyway.

4. DNA is Right-Handed
When you see DNA depicted as a double helix, you can clearly see that its structure is twisted. That twist makes DNA a “chiral” molecule, meaning it is asymmetric in such a way that a DNA molecule and its mirror image are not superimposable. Examples of chirality are everywhere. Take your hands, for example. For all intents and purposes, your left hand and right hand are mirror images of one another, but no matter how you twist or position either hand, you’ll find that it is impossible to orient the two of them in exactly the same way. Chirality is the reason you can’t shake a person’s right hand with your left, or wear your left shoe on your right foot.

Chiral molecules are said to possess “handedness,” and in DNA, that handedness is characterized by the direction of its twisting strands. DNA’s right-handedness can be identified by a simple trick involving your hands. Take your right hand and, with your thumb pointing upward, imagine grasping the spiral pictured here (in this diagram there is only one helix… in DNA there are two, but this rule still applies). Now imagine your hand twisting around the outside of the spiral, tracing its grooves in the direction that your fingertips are pointing. Your hand should rotate upward along the helix. If you try this trick with your left hand, again grasping the helix with your thumb pointing up, you’ll notice that following the rotation of the helix in the direction your fingertips are pointing will cause your hand to move downward.

That means that if you’re reading an article online or in a magazine and it features a picture of aleft-handed double helix, that picture is wrong, wrong, wrong.

Ten Things You Probably Didn't Know About DNA3. Except when it isn’t
Yes, most DNA is right-handed. The DNA molecule that Watson and Crick described, for example, was right-handed. But DNA can actually exist in a variety of biologically active helical conformations. The one most people are familiar with is called B-DNA (depicted at center in the image shown here). On the far left is another conformation of DNA, (called A-DNA) that is also right-handed, but more tightly wound than B-DNA. On the far right, however, is a left-handed conformation, known (awesomely) as Z-DNA. So before you go on a pedantic rampage about left- and right-handed DNA, make sure you’re not getting all bent out of shape over some Z-DNA (or a plot point in the upcoming Spider-Man movie… watch for the left-handed helices around 1:30).

2. DNA can exist in a variety of bizarre and unfamiliar forms
You want a triple helix? You got it. A transient, four-stranded super-molecule (that just happens to be the lynchpin step in the process of genetic recombination)?Coming right up. How about a smiley face, a map of the Americas, or a nanodrug-carrying box, complete with lock and key? Yeah, we’ve got those, too. For years, DNA has been growing in popularity as a nano-scale building material for applications in everything from medicine to technology. And we’ve only just begun to appreciate what these DNA nanomachines are capable of. [DNA tetrahedron via]

1. We can make synthetic DNA
Strands of DNA and RNA are formed by stringing together long chains of molecules called nucleotides. A nucleotide is made up of three chemical components: a phosphate (labeled here in red), a five-carbon sugar group (labeled here in yellow, this can be either a deoxyribose sugar - which gives us the “D” in DNA - or a ribose sugar - hence the “R” in RNA), and one of five standard bases (adenine, guanine, cytosine, thymine or uracil, labeled in blue).

By swapping out artificial molecules in place of any of these chemical components, researchers can actually make synthetic DNA. One of the most commonly created forms of synthetic DNA is XNA, which swaps out the sugar group for any number of artificially produced molecules. Just last month, researchers succeeded in creating a genetic system that allowed this XNA to replicate and evolve. And to top it all off, this “alien” XNA is actually stronger than the real thing.



fuckyeahmolecularbiology:

Karyotypes describe the number of chromosomes in an organism, and provide a picture of what they look like under a light microscope. Attention is paid to their length, the position of the centromeres, banding pattern, differences between the sex chromosomes, and any other physical characteristics.

Karyotypes can be used for many purposes - to study chromosomal aberrations, cellular function, taxonomic relationships, and to gather information about past evolutionary events, for example. Chromosomal disorders, like Down Syndrome, show up clearly in karyotype analysis.


Via Diary of a medical scientist


aamukherjee:

expose-the-light:

Ingredients of life

Illustrations of Chemical compounds by Rex

An ultra-cool set of posters! Dopamine is the one I am most familiar with and it’s a very interesting chemical not only because it causes our emotional responses, but because it controls the ‘reward system’ of our brain which in turn motivates us to repeat actions that we enjoy (even if they are not good for our overall health, as is the case with chemical addiction).

But rather than dwelling too much on the more serious effects of these chemical responses, focus more on the greatness of the posters!


Via Atoms to Atoms




fuckyeahmolecularbiology:

Deadly Beauty

Ever since our conception, humans have fallen victim to infectious disease - microscopic, airbourne pathogens and parasites that infiltrate our bodies and turn them against us. Shown above, and described below, are 10 of the deadliest pathogens humankind has encountered throughout history. Some, like poliovirus, show how far we’ve come - while others, such as HIV, remind us how far we have still to go in the  battle against nature’s smallest assassins.

The Bubonic Plague: Also called the Black Death due to the formation of necrotic tissue on living victims, the bubonic plague - most commonly caused by a small bacterium, Yersinia pestis - is estimated to have killed around 75 million people, including half the total population of Europe. Although controlled, the bubonic plague is still endemic today.

Poliomyelitis: One of the most dreaded childhood diseases of the 20th century, the causitive agent of polio, poliovirus, has caused 10,000 deaths since 1916, and permanent paralysis to thousands. Its presence in the population is substantially reduced in the modern day due to an effective polio vaccine and vaccination programme.

Smallpox: Marked in history as the pathogen of choice for the first-ever documented case of biological warfare, in which smallpox-infected blankets were thrown into enemy camps, smallpox and its two viral agents - variola major (pictured above) and variola minor - decimated the Native American population in the United States from 12 million to 235,000. It is also credited with destroying the Aztec civilisation when brought to South America by the conquistadors. WHO declared the official eradication of smallpox in 1979, although samples are still stored in laboratories for research.

Cholera: Caused by the bacterium Vibrio cholerae, cholera is perhaps best known for being one of the most rapidly fatal illnesses known - a healthy person may become hypotensive within an hour of symptoms onset, and will die within 2-3 if no treatment is provided. Cholera has killed approximately 12,000 people since 1991.

Spanish Influenza: An especially virulent strain of Influenza A virus, subtype H1N1, killed 50 to 100 million people in the years 1918 and 1919 alone. Many of its victims were healthy young adults, in stark contrast to the flu of today, which usually preys on the old and infirm. The extraordinary death toll is believed to have resulted from the extreme virulence of the virus and the severity of symptoms, believed to have been caused by cytokine storms.

Tuberculosis: Caused by various strains of mycobacteria, most commonly Mycobacterium tuberculosis, tuberculosis is a usually lethal and sadly common infectious disease that affects up to 80% of the population in some African and Asian countries.

Influenza: Commonly known as the flu, influenza is caused by a massive family of RNA-based viruses of the family orthomyxoviridae. It causes about 36,000 deaths per year.

Malaria: Malaria is a vector-bourne infectious disease caused by protozoan parasites of the genus Plasmodium, typically Plasmodium falciparum and Plasmodium vivax. It causes approximately 2.7 million deaths per year, a large percentage of them young children in sub-Saharan Africa. No vaccine has yet been created for malaria; drugs must be taken continuously to reduce the risk of infection.

AIDS: Acquired Immunodeficiency Syndrome (AIDS) is caused by HIV, the human immunodeficiency virus. Death results from specific damage to the immune system, leaving people susceptible to opportunistic infection in the late stages. Although treatments exist to decelerate the virus’ progression, there is no known cure, and 21 million have died of AIDS since 1981. HIV is usually passed by blood-to-blood transmission.

Ebola: Ebola is a potentially lethal hemorrhagic fever that has caused 160,000 deaths since 2000. It is a zoonotic disease caused by the ebola virus whose primary animal vector is thought to be the fruit bat. Mortality rates are generally very high, in the region of 80% – 90%, with the cause of death usually due to hypovolemic shock or organ failure.

__________________________________________________________________

Images: Top left: Yersinia pestis. Top right: poliovirus. Second line, left: Variola major. Second line, center: Vibrio cholerae. Second line, right: Influenza A, subtype H1N1. Third line, left: Mycobacterium tuberuclosis. Third line, right: Influeza A. Bottom left: Plasmodium falciparum in red blood cells. Bottom center: HIV. Bottom right: Ebola virus.


Via Atoms to Atoms


medicalschool:

A carpet of red blood cells clearly showing their typical biconcave disc shape. This highly flexible shape provides a large surface area for absorption and release of oxygen and carbon dioxide, and allows the cells to move easily through the finest of capillaries. (Colour-enhanced scanning electron micrograph by Dave McCarthy and Annie Cavanagh)



biocanvas:

A mouse retinal ganglion cell tagged with GFP (green) on top of starburst amacrine cells (red) and cells whose nuclei were stained with DAPI (blue).

Image by Daniel O’Shea, Princeton University.



cannabisabyss:

Cannabis plant. Coloured scanning electron micrograph (SEM) of the surface of a cannabis (Cannabis sativa) plant. The pointed hairs are called lithocyst cells. They contain cystoliths (calcium carbonate crystals). Glandular cells called trichomes are also present. These are capitate trichomes tbat have stalks. These trichomes secrete a resin containing tetrahydrocannabinol, the active component of cannabis when used as medication.




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